PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_021128-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family C2H2
Protein Properties Length: 727aa    MW: 79219.9 Da    PI: 4.5077
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_021128-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.80.000772143123
                   EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                   ++C+ Cg +F++++   +H r H
  NNU_021128-RA 21 FRCHRCGWPFPNQHPSAKHRRAH 43
                   89*****************9998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501578.9332143IPR007087Zinc finger, C2H2
PROSITE patternPS0002802343IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 727 aa     Download sequence    Send to blast
MDGEAHTQIH PPENENENHV FRCHRCGWPF PNQHPSAKHR RAHKKVCGTL DGYRLSESER  60
GDPESPTNTW SLKQCDPIES NENKDAGTEE DEFGDAVAES TNTVAALATA SIEVEAATEP  120
VEASGNNTEF LPIEALVITE DASGCTSALS PTIASSESNI QPVKIVMDNS KVCIGQETYN  180
LQNEDSERVN LINNSVKVGD TEGEVGVKSD YEGSEVSEYP FKDIPATSVP GGSTAPLHIE  240
KLKIAEDEKS CYSSTSPTQF EAPKAGLGKT VEDQNEKGEV NEDPLVEIGS AYETVECQNV  300
KAEASEYPSK DITSTSISSN STDSLLVETM EVTKDEKSCD SAMSPIKIET PRATPNETVE  360
GQNEKTKVNT YLHADALNFN STVSLLVEKL EITKDEKSCD LVRSPIEFEA PRAAPNETPE  420
GQNEKAEANE LSLADTSDFS GSLAASRATN MALEGSKDPM KLDIPLTSGN GELIEEKGNH  480
NNDSIFKETH SCQLVSKKDE GFDVTSSAEQ ALKENLQQER GIADTVKDLC VVQKTDGSES  540
KATTNELNNS VKKFDGGDPT NDNSVILQNG NDNNLLKHQF GSFDVAACRL GSMPNRTLAS  600
TRDAMEEMNT PVQAQKANQK NIGTSIEHHN EMDIFEPPSF MTLVEPTKAN YQKNIASGWF  660
PSLNHIEHET KGRKKNEHII TEVTKSTGKP HGTLKNLLTE AKVKKYHKYS QDKQNTGTGS  720
DGRTNKV
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010278450.10.0PREDICTED: uncharacterized protein LOC104612643